Quick Order    Shopping Cart    Online Seminar    Contact    My Account
Home  >  Products  >  Microarray Home  >  Array List  >  Human Toxicology & Drug Resistance

Oligo GEArray® Human Toxicology & Drug Resistance Microarray

Oligo GEArrays - Discontinued Product Announcement - Effective January 1, 2010

See this Pathway in PCR Array Format!
HybTube Format Cat. No.: OHS-401
HybPlate Format Cat. No.: EHS-401

Description
The Oligo GEArray® Human Toxicology & Drug Resistance Microarray profiles the expression of 263 genes related to the metabolic processes of cell stress, cell toxicity, drug resistance, and drug metabolism. Genes critical in drug metabolism and resistance such as those encoding enzymes important for drug transport and phase I metabolism (specifically P450-mediated oxidation) are included. Various covalent modification enzymes important for phase II metabolism are also represented. This array includes genes whose expression level is indicative of stress and toxicity as well as those genes representative of pathways activated by prolonged stress. Among these are genes directly up-regulated by oxidative or metabolic stress and genes involved in cell death by apoptosis or necrosis, growth arrest & senescence, and proliferation & carcinogenesis. Genes involved in cellular stress response are also represented, including those encoding DNA repair enzymes, cell cycle regulators, growth factor and hormone receptors, transcription factors, and molecular chaperones. Through a simple side-by-side hybridization experiment you can determine differential gene expression between your samples.

Need more information about GEArray products? please visit Microarray Home or send Email to Technical Support

Useful Links
Pricing and Ordering Gene Table GEArray Service
User Manual White Paper GEArray ThermoShaker
Related Products for the Genes on This Array
shRNA Plasmids qPCR Gene Assays Modify This Array
Functional Gene Grouping

Apoptosis:
Induction of Apoptosis: BAX, CASP10, CDKN1A, IL18, LTA, TNFSF10, TNFSF6, TP53, TRADD.
Anti-apoptosis: AKT1, BAG1, BCL2, BCL2L1, BCL2L2, IGF1R, IL1A, NFKB1, TNF.
Other Genes Involved in Apoptosis: AHR, BRCA1, CASP1, CASP8, CLU, DNAJA3, E2F1, GADD45A, GADD45B, IL1B, NFKBIA, TNFRSF1A.

Cell Cycle:
Cell Cycle Arrest and Checkpoint: BRCA1, CDKN1A, CDKN1B, CDKN2A, CDKN2D, DDIT3, GADD45A, MYC, RB1, TP53.
Negative Regulation of the Cell Cycle: APC, ATM, BAX, BRCA1, CDKN2A, CDKN2D, MLH1, MSH2, RB1, TP53.
Other Genes Involved in the Cell Cycle: ABL1, AHR, BCL2, BRCA2, CCNC, CCND1, CCNE1, CCNG1, CCT2, CCT4, CCT7, CDK2, CDK4, CHEK2, DNAJA2, E2F1, FGF2, IGF1R, IL1A, IL1B, PCNA, RB1.,/p>

Cell Growth, Proliferation and Differentiation:
Chemokines and Cytokines: CCL21, CCL3, CCL4, CSF2, CXCL10, GDF15, IL18, IL1A, IL1B, IL6, LTA, MIF, TNF, TNFSF10, TNFSF6.
Growth Factors and Receptors: EGFR, ERBB2, ERBB3, ERBB4, FGF2, IGF1R, IGF2R, MET.
Negative Regulators of Cell Growth and Proliferation: BCL2, CDKN1A, CDKN1B, CDKN2A, CDKN2D, ESR2, IGFBP6, IL1A, IL1B, IL6, MDM2, MT3.
Positive Regulators of Cell Growth and Proliferation: CDK2, CXCL10, DNAJA2, FGF2, IGF1R, IL18, IL6, NOS2A, TNFRSF11A.
Other Genes Regulating Cell Growth and Proliferation: ABL1, AR, BCR, BRCA1, CCND1, CDK4, DDIT3, E2F1, ESR1, FOS, IGFBP6, MYC, NFKB2, PCNA, PRDX1, RARA, RARB, TOP1.

Transporters: ABCB1, ABCB4, ABCC1, ABCC2, ABCC3, ABCC5, ABCC6, ABCG2, AP1S1, AR, CRABP1, IGF2R, RAD50, TPMT.

Response to Stress:
Drug Response: ABCB1, ABCB4, ABCC1, ABCC6, ABCG2, CTPS, MVP, NAT8.
Response to DNA Damage Stimulus: ATM, BRCA1, CHEK2, DDIT3, GADD45A, RAD23A, XRCC2.
Response to Oxidative Stress: CAT, GPX1, GPX2, NUDT1, PRDX2, SOD1, SOD2.
Response to Other Stresses: AHR, AKT1, CCL4, CES1, DNAJB4, DNAJB5, EPHX1, EPHX2, ERCC1, GADD45B, GSR, GSTA3, GSTA4, GSTT1, HIF1A, HSPB2, HYOU1, MT1X, MT3, NFKB1, NFKBIA, NQO1, PON3, PPARG, PPARGC1A, RAD51, SERPINH1, TNF, TRA1.

Chaperones and Heat Shock Proteins: BAG1, CALR, CANX, CCT2, CCT3, CCT4, CCT5, CCT7, CCT8, CRYAA, CRYAB, DNAJA1, DNAJA2, DNAJA3, DNAJA4, DNAJB1, DNAJB11, DNAJB2, DNAJB4, DNAJB5, DNAJB9, DNAJC4, DNAJC5, DNAJC7, DNAJC8, HSF1, HSPA1A, HSPA1L, HSPA2, HSPA4, HSPA6, HSPA8, HSPA9B, HSPB1, HSPB2, HSPB3, HSPCA, HSPCB, HSPD1, HSPE1, HSPH1, HYOU1, SERPINH1, ST13, TCP1, TRA1.

Transcription Factors and Regulators:
Ligand-dependent Nuclear Receptors: AHR, ESR1, ESR2, NR1I2, NR1I3, PPARD, PPARG, PPARGC1A, RARA, RARB, RARG, RXRA, RXRB, RXRG.
Other Transcription Factors and Regulators: ABL1, AR, ARNT, BRCA1, BRCA2, CALR, CCNC, DDIT3, E2F1, EGR1, ELK1, ERCC3, FOS, HIF1A, HOP, HSF1, MYC, MYST2, MYST4, NFKB1, NFKB2, NFKBIA, NFKBIB, RB1, RELB, SAFB, TNF, TP53.

Drug Metabolizing Enzymes:
Acyltransferases: ACAT1, CHAT, CRAT, DLAT, HAT1, NAT1, NAT2, NAT5.Methyltransferases: COMT, HNMT, MGMT, NNMT, TPMT, TYMS.
Sulfotransferases: CHST1, CHST10, CHST2, CHST3, CHST4, CHST5, CHST6, CHST7, CHST8, GAL3ST1, SULT1A1, SULT1B1, SULT1C1, SULT1C2, SULT1E1, SULT2A1, SULT2B1, SULT4A1, TPST1, TPST2.
Oxidoreductases: ACADSB, CAT, CYP11A1, CYP11B2, CYP1A1, CYP1A2, CYP1B1, CYP20A1, CYP24A1, CYP26B1, CYP2A6, CYP2B6, CYP2C8, CYP2C9, CYP2D6, CYP2E1, CYP2F1, CYP3A4, CYP3A5, CYP4A11, CYP4B1, CYP4F3, CYP7A1, CYP7B1, CYP8B1, DHFR, DIA1, DPYD, FMO1, FMO4, FMO5, GPX1, GPX2, GSR, HMOX1, HMOX2, MAOA, MAOB, NOS2A, NQO1, POR, PRDX1, PRDX2, PTGS1, PTGS2, SOD1, SOD2, SRD5A2, TBXAS1, XDH.
Glutathione Peroxidases: GPX1, GPX2, GSTA3, GSTA4, GSTM1, GSTM2, GSTM3, GSTM5, GSTO1, GSTP1, GSTT1, GSTT2, MGST1, MGST2, MGST3.

Storage Conditions
Please check the kit components immediately after you receive this package. SABiosciences is only responsible for missing items reported within two (2) business days of receipt.

GEArray microarrays are shipped at ambient temperature enclosed in either a HybTube or ExpressPak Storage Box. They should be stored at -20 ºC upon receipt.

References
  1. Parcellier A, Gurbuxani S, Schmitt E, Solary E, Garrido C. Heat shock proteins, cellular chaperones that modulate mitochondrial cell death pathways. Biochem Biophys Res Commun. 2003 May 9; 304 (3): 505-12.
  2. Martindale JL, Holbrook NJ. Cellular response to oxidative stress: signaling for suicide and survival. J Cell Physiol. 2002 Jul; 192 (1): 1-15.
  3. Dalton TP, Puga A, Shertzer HG. Induction of cellular oxidative stress by aryl hydrocarbon receptor activation. Chem Biol Interact. 2002 Sep 20; 141 (1-2): 77-95.
  4. Owuor ED, Kong AN. Antioxidants and oxidants regulated signal transduction pathways. Biochem Pharmacol. 2002 Sep; 64 (5-6): 765-70.
  5. Soti C, Sreedhar AS, Csermely P. Apoptosis, necrosis and cellular senescence: chaperone occupancy as a potential switch. Aging Cell. 2003 Feb; 2 (1): 39-45.
  6. Kregel KC. Heat shock proteins: modifying factors in physiological stress responses and acquired thermotolerance. J Appl Physiol. 2002 May; 92 (5): 2177-86.
  7. Leeder JS. (2001) Pharmacogenetics and Pharmacogenomics. Pediatr Clin North Am. 48: 765-81.
  8. Gram TE, Okine LK, Gram RA (1986). The Metabolism of Xenobiotics By Certain Extrahepatic Organs And Its Relation To Toxicity. Annu Rev Pharmacol Toxicol. 26:259-91.
  9. Anders MW, editor (1985). Bioactivation Of Foreign Compounds. New York Academic.
  10. Brodie BB, Axelrod J, Cooper JR, et al (1955). Detoxication Of Drugs And Other Foreign Compounds By Liver Microsomes. Science 121: 603-604.
  11. Nelson DR, Koymans L, Kamataki T, et al (1996). P450 Superfamily: Update On New Sequences, Gene Mapping, Accession Numbers And Nomenclature. Pharmacogenetics 6:1-42.
  12. Gonzalez FJ, Nebert DW (1990). Evolution Of The P450 Gene Superfamily: Animal-Plant ôWarfareö, Molecular Drive And Human Genetic Differences In Drug Oxidation. Trends Genet 6: 182-186.
  13. Parkinson A (1996) An Overview Of Current Cytochrome P450 Technology For Assessing The Safety And Efficacy Of New Materials. Toxicol Pathol 24: 45-57.
  14. Schwab M, Klotz U. (2001). Pharmacokinetic Considerations In The Treatment Of Inflammatory Bowel Disease. Clin Pharmacokinet. 40: 723-51.
  15. Silverman JA. Related Articles (1999) Multidrug-Resistance Transporters. Pharm Biotechnol. 12: 353-86.
  16. Weinshilboum R. (1989) Methyltranserase Pharmacogenetics. Pharmacol Ther 43: 77-90.
  17. Kaufmann FC, editor (1994). Conjugation-deconjugation in drug metabolism Sulfotransferase enzymes handbook of experimental pharmacology, Vol 112.
  18. Falany CN (1997) Enzymology of Human Cytosolic Sulfotransferase FASEB J 11: 206-216.
  19. Daujat M, Pichard L, Fabre I, et al (1991) Induction Protocols For Cytochrome P450 IIIA in vivo and in Primary Cultures of Animal and Human Hepatocytes. Methods Enzymol 206: 345-353.
  20. King CD, Rios GR, Green MD, Tephly TR. (2000) UDP-Glucuronosyltransferases. Curr Drug Metab. 1: 143-61.
  21. Fretland AJ, Omiecinski CJ (2000). Epoxide Hydrolases: Biochemistry And Molecular Biology. Chem Biol Interact. 129: 41-59.
  22. Chang BD, Swift ME, Shen M, Fang J, Broude EV, Roninson IB, Molecular determinants of terminal growth arrest induced in tumor cells by a chemotherapeutic agent, Proc Natl Acad Sci U S A 2002 Jan 8; 99(1): 389-94.
  23. Li J, Lee JM, Johnson JA, Microarray analysis reveals an antioxidant responsive element-driven gene set involved in conferring protection from an oxidative stress-induced apoptosis in IMR-32 cells, J Biol Chem 2002 Jan 4; 277(1): 388-94.
  24. Bouton CM, Hossain MA, Frelin LP, Laterra J, Pevsner J, Microarray analysis of differential gene expression in lead-exposed astrocytes, Toxicol Appl Pharmacol 2001 Oct 1; 176(1): 34-53.
  25. Liu J, Kadiiska MB, Liu Y, Lu T, Qu W, Waalkes MP, Stress-related gene expression in mice treated with inorganic arsenicals, Toxicol Sci 2001 Jun; 61(2): 314-20.
  26. Reilly TP, Bourdi M, Brady JN, Pise-Masison CA, Radonovich MF, George JW, Pohl LR, Expression profiling of acetaminophen liver toxicity in mice using microarray technology, Biochem Biophys Res Commun 2001 Mar 23; 282(1): 321-8.
  27. Rao L, Puschner B, Prolla TA, Gene expression profiling of low selenium status in the mouse intestine: transcriptional activation of genes linked to DNA damage, cell cycle control and oxidative stress, J Nutr 2001 Dec; 131(12): 3175-81.
  28. Rao L, Puschner B, Prolla TA, Gene expression profiling of low selenium status in the mouse intestine: transcriptional activation of genes linked to DNA damage, cell cycle control and oxidative stress, J Nutr 2001 Dec; 131(12): 3175-81.
  29. Laabich A, Li G, Cooper NG, Characterization of apoptosis-genes associated with NMDA mediated cell death in the adult rat retina, Brain Res Mol Brain Res 2001 Jul 13; 91(1-2): 34-42.
  30. Waring JF, Ciurlionis R, Jolly RA, Heindel M, Ulrich RG, Microarray analysis of hepatotoxins in vitro reveals a correlation between gene expression profiles and mechanisms of toxicity, Toxicol Lett 2001 Mar 31; 120 (1-3): 359-68.,/li>
  31. Bartosiewicz M, Penn S, Buckpitt A, Applications of gene arrays in environmental toxicology: fingerprints of gene regulation associated with cadmium chloride, benzo(a)pyrene, and trichloroethylene, Environ Health Perspect 2001 Jan;109(1):71-4.
  32. Frueh FW, Hayashibara KC, Brown PO, Whitlock JP Jr, Use of cDNA microarrays to analyze dioxin-induced changes in human liver gene expression, Toxicol Lett 2001 Jul 6; 122(3): 189-203.
  33. Huang Q, Dunn RT 2nd, Jayadev S, DiSorbo O, Pack FD, Farr SB, Stoll RE, Blanchard KT, Assessment of cisplatin-induced nephrotoxicity by microarray technology, Toxicol Sci 2001 Oct; 63(2): 196-207.
  34. Harries HM, Fletcher ST, Duggan CM, Baker VA, The use of genomics technology to investigate gene expression changes in cultured human liver cells, Toxicol In Vitro 2001 Aug-Oct; 15 (4-5): 399-405.
  35. Chen H, Liu J, Merrick BA, Waalkes MP, Genetic events associated with arsenic-induced malignant transformation: applications of cDNA microarray technology, Mol Carcinog 2001 Feb; 30(2): 79-87.
  36. Thomas RS, Rank DR, Penn SG, Zastrow GM, Hayes KR, Pande K, Glover E, Silander T, Craven MW, Reddy JK, Jovanovich SB, Bradfield CA, Identification of toxicologically predictive gene sets using cDNA microarrays, Mol Pharmacol 2001 Dec; 60 (6): 1189-94.
  37. Bulera SJ, Eddy SM, Ferguson E, Jatkoe TA, Reindel JF, Bleavins MR, De La Iglesia FA, RNA expression in the early characterization of hepatotoxicants in Wistar rats by high-density DNA microarrays, Hepatology 2001 May; 33 (5): 1239-58.
  38. Yu Z, Ford BN, Glickman BW, Identification of genes responsive to BPDE treatment in HeLa cells using cDNA expression assays, Environ Mol Mutagen 2000; 36(3): 201-5.
  39. Cunningham MJ, Liang S, Fuhrman S, Seilhamer JJ, Somogyi R, Gene expression microarray data analysis for toxicology profiling, Ann N Y Acad Sci 2000; 919: 52-67.
  40. Karran P (2001). Mechanisms of tolerance to DNA damaging therapeutic drugs. Carcinogenesis 22: 1931-1937.
  41. Veldman RJ, et al. (2002) Altered sphingolipid metabolism in multidrug-resistant ovarian cancer cells is due to uncoupling of glycolipid biosynthesis in the Golgi apparatus. FASEB J. 16: 1111-1113.
  42. and Cabot MC (2001) Ceramide glycosylation potentiates cellular multidrug resistance. FASEB J. 15: 719-730.
  43. 2) Pharmacogenomics, regulation and signaling pathways of phase I and II drug metabolizing enzymes. Curr. Drug Metab. 3: 481-490.
  44. Zigman M, Berger J (2002) Cholesterol regulates ABCD2 expression: implications for the therapy of X-linked adrenoleukodystrophy. Hum. Mol. Genet. 11: 2701-2708.
  45. ation of cisplatin resistance and homologous recombinational repair by the TFIIH subunit XPD. Cancer Res. 62: 5457-5462.
  46. pression of the 18 kDa and 22/24 kDa FGF-2 isoforms results in differential drug resistance and amplification potential. J. Cell. Physiol. 193: 64-72.
  47. unction of multiple IkappaB: NF-kappaB complexes in the resistance of cancer cells to Taxol-induced apoptosis. Oncogene 21: 6510-6519.
  48. ycogen synthase kinase 3: an emerging therapeutic target. Trends Mol. Med. 8: 126-132.